CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfurivibrio alkaliphilus AHT2
 

Desulfurivibrio alkaliphilus AHT2

Genome
 

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Total size (bp) 3097763
G + C content (%) 60.29
Coding sequences 2620
Coding density (%) 88.72
Average gene length (bp) 1049

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 68
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
71 21 2 2 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (65 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 38
Histidine Kinase, Hybrid 22
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (63) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 3CheY 17CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 15OmpR 4PglZ 0PilB 0PleD 6
PleD_VieA 4PrrA 1RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(4)
HisKa 1
Hpt 3

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