CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Desulfobacca acetoxidans DSM 11109
 

Desulfobacca acetoxidans DSM 11109

Genome
 

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Total size (bp) 3282536
G + C content (%) 52.89
Coding sequences 2866
Coding density (%) 84.43
Average gene length (bp) 967

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 57
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
41 18 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (44 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 30
Histidine Kinase, Hybrid 13
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (41) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CyC-C Family RpfG Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family CyC-C Family RpfG Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 17CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 14OmpR 2PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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