CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Deferribacter desulfuricans SSM1
 

Deferribacter desulfuricans SSM1

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 2234389
G + C content (%) 31.11
Coding sequences 2115
Coding density (%) 92.88
Average gene length (bp) 981

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 122
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
36 20 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (37 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 24
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (39) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 1CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 0
NtrC 9OmpR 5PglZ 0PilB 0PleD 3
PleD_VieA 1PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page