CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Dechlorosoma suillum PS
 

Dechlorosoma suillum PS

Genome
 

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Total size (bp) 3806980
G + C content (%) 65.37
Coding sequences 3443
Coding density (%) 90.27
Average gene length (bp) 998

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 133
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
59 33 4 2 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (68 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 48
Histidine Kinase, Hybrid 8
Histidine Kinase, Unorthodox 7
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (80) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 2CheY 14CitT 0CsrA 0
CyC-C 0FrzZ 3HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 9
NtrC 9OmpR 14PglZ 0PilB 0PleD 3
PleD_VieA 5PrrA 3RpfG 7RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 0
Hpt 2

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