CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Cylindrospermum stagnale PCC 7417
 

Cylindrospermum stagnale PCC 7417

Genome
 

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Total size (bp) 7003560
G + C content (%) 42.3
Coding sequences 5811
Coding density (%) 80.19
Average gene length (bp) 966

Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 142
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
123 17 3 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (107 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 65
Histidine Kinase, Hybrid 38
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (60) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family YesN Family RsbU Family PleD Family VieA Family CheY Family unclassified Family OmpR Family NarL Family CyC-C Family YesN Family RsbU Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 18CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 11
NtrC 0OmpR 13PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 0RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 11
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 2
Hpt 1

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