CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Cycloclasticus sp. P1
 

Cycloclasticus sp. P1

Genome
 

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Total size (bp) 2363215
G + C content (%) 42
Coding sequences 2248
Coding density (%) 91.2
Average gene length (bp) 959

Histidine domain Logo
Mean spacer hisKA - HATPase domains 48
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 58
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
10 11 0 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (16 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 10
Histidine Kinase, Hybrid 3
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (19) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family RpfG Family PleD_VieA Family VieA Family CheY Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family RpfG Family PleD_VieA Family VieA Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 3OmpR 5PglZ 0PilB 0PleD 0
PleD_VieA 2PrrA 2RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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