CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Cyanobacterium aponinum PCC 10605
 

Cyanobacterium aponinum PCC 10605

Genome
 

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Total size (bp) 4114099
G + C content (%) 34.96
Coding sequences 3358
Coding density (%) 80.19
Average gene length (bp) 982

Histidine domain Logo
Mean spacer hisKA - HATPase domains 52
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 148
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
81 5 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (43 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 22
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (45) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family OmpR Family NarL Family RpfG Family RsbU Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 5
NtrC 0OmpR 11PglZ 0PilB 0PleD 6
PleD_VieA 5PrrA 0RpfG 1RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 2
Hpt 1

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