CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Corallococcus coralloides DSM 2259
 

Corallococcus coralloides DSM 2259

Genome
 

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Total size (bp) 10080619
G + C content (%) 69.9
Coding sequences 8033
Coding density (%) 91.74
Average gene length (bp) 1151

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 102
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
188 45 4 2 Hexad1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (160 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 100
Histidine Kinase, Hybrid 49
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 10
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (141) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family MerR Family Xre Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CyC-C Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family MerR Family Xre Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 7
CheC 0CheV 1CheY 51CitT 0CsrA 0
CyC-C 2FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 5MerR 1NarL 7
NtrC 25OmpR 9PglZ 0PilB 0PleD 8
PleD_VieA 0PrrA 1RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 1YcbB 0YesN 0unclassified 20
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 3
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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