CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Coprococcus sp. ART55/1
 

Coprococcus sp. ART55/1

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 3123007
G + C content (%) 41.08
Coding sequences 2122
Coding density (%) 63.06
Average gene length (bp) 928

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 14
Max spacer hisKA - HATPase domains 122
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
22 16 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (29 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 24
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (30) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family Spo0A Family YesN Family RpfG Family CheY Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family RpfG Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 2
NtrC 0OmpR 18PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 2RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 0
misPredicted TCS proteins (10)
misPredicted Histidine Kinase 6
misPredicted Response Regulator 3
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

Locations of visitors to this page