CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Coprococcus catus GD/7
 

Coprococcus catus GD/7

Genome
 

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Total size (bp) 3522704
G + C content (%) 42.43
Coding sequences 2972
Coding density (%) 76.04
Average gene length (bp) 901

Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 12
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
30 15 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (31 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 20
Histidine Kinase, Hybrid 11
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (30) - Phylogenetic Tree - Data Heatmap
OmpR Family LytTR Family Spo0A Family YesN Family RpfG Family unclassified Family OmpR Family LytTR Family Spo0A Family YesN Family RpfG Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 0CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 0
NtrC 0OmpR 20PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 3RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 2
misPredicted TCS proteins (13)
misPredicted Histidine Kinase 8
misPredicted Response Regulator 5
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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