CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Colwellia psychrerythraea 34H
 

Colwellia psychrerythraea 34H

Genome
 

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Total size (bp) 5373180
G + C content (%) 38.01
Coding sequences 4910
Coding density (%) 84.7
Average gene length (bp) 927

Histidine domain Logo
Mean spacer hisKA - HATPase domains 36
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 87
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
41 35 4 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (56 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 41
Histidine Kinase, Hybrid 10
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (66) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family MerR Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family MerR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 3NarL 8
NtrC 8OmpR 22PglZ 0PilB 0PleD 2
PleD_VieA 2PrrA 3RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 6
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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