CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Clostridium tetani E88
 

Clostridium tetani E88

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 2799251
G + C content (%) 28.75
Coding sequences 2380
Coding density (%) 85.85
Average gene length (bp) 1010
Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 58
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
12 24 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (31 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 29
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (29) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family Spo0A Family YesN Family AmiR_NasR Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family LytTR Family Spo0A Family YesN Family AmiR_NasR Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 1CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 0
NtrC 1OmpR 18PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 2
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page
Date : 17 April 2024, 1:43:44 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales