CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Clostridium thermocellum ATCC 27405
 

Clostridium thermocellum ATCC 27405

Genome
 

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Total size (bp) 3843301
G + C content (%) 38.99
Coding sequences 3173
Coding density (%) 82.89
Average gene length (bp) 1004

Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 51
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
27 18 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (33 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 24
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family Spo0A Family YesN Family CheB Family RpfG Family RsbU Family PleD Family CheY Family OmpR Family NarL Family Spo0A Family YesN Family CheB Family RpfG Family RsbU Family PleD Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 4
CheC 0CheV 0CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 0OmpR 13PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 0RpfG 2RsbU 1Sarp 0
Spo0A 2TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 3unclassified 0
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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