CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Clostridium sticklandii DSM 519
 

Clostridium sticklandii DSM 519

Genome
 

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Total size (bp) 2715461
G + C content (%) 33.3
Coding sequences 2573
Coding density (%) 89.59
Average gene length (bp) 946

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 14
Max spacer hisKA - HATPase domains 91
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
12 16 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (18 + 1) - Phylogenetic Tree - Data Heatmap
Classic Unorthodox CheA Classic Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (26) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family CheC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family CheC Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 1CheV 1CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 3
NtrC 0OmpR 9PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 2RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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