CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Clostridium lentocellum DSM 5427
 

Clostridium lentocellum DSM 5427

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 4714237
G + C content (%) 34.33
Coding sequences 4182
Coding density (%) 85.22
Average gene length (bp) 961

Histidine domain Logo
Mean spacer hisKA - HATPase domains 33
Min spacer hisKA - HATPase domains 3
Max spacer hisKA - HATPase domains 57
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
27 36 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (46 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 45
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (51) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheV Family CheY Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheV Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 1CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 7MerR 0NarL 2
NtrC 0OmpR 25PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 9unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

Locations of visitors to this page