CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Clostridium cellulolyticum H10
 

Clostridium cellulolyticum H10

Genome
 

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Total size (bp) 4068724
G + C content (%) 37.4
Coding sequences 3390
Coding density (%) 86.58
Average gene length (bp) 1039

Histidine domain Logo
Mean spacer hisKA - HATPase domains 28
Min spacer hisKA - HATPase domains 9
Max spacer hisKA - HATPase domains 57
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
14 30 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (37 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 35
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (40) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family CheY Family Xre Family unclassified Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family CheY Family Xre Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 3CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 4MerR 0NarL 1
NtrC 0OmpR 14PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 2TrxB 0VieA 0VieB 0WcaA 0
Xre 1YcbB 0YesN 13unclassified 1
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 2
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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