CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Chromobacterium violaceum ATCC 12472
 

Chromobacterium violaceum ATCC 12472

Genome
 

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Total size (bp) 4751080
G + C content (%) 64.83
Coding sequences 4405
Coding density (%) 88.52
Average gene length (bp) 955

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 9
Max spacer hisKA - HATPase domains 85
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
52 29 1 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (52 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 29
Histidine Kinase, Hybrid 6
Histidine Kinase, Unorthodox 13
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (64) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family BetR Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family VieA Family CheY Family BetR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 2CheB 3
CheC 0CheV 3CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 4MerR 0NarL 7
NtrC 3OmpR 10PglZ 0PilB 0PleD 2
PleD_VieA 3PrrA 3RpfG 5RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 4VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 7
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(5)
HisKa 3
Hpt 2

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