CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Chloroflexus sp. Y-400-fl
 

Chloroflexus sp. Y-400-fl

Genome
 

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Total size (bp) 5268950
G + C content (%) 56.68
Coding sequences 4159
Coding density (%) 81.57
Average gene length (bp) 1033

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 23
Max spacer hisKA - HATPase domains 127
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
75 21 4 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (66 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 45
Histidine Kinase, Hybrid 18
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (67) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family RsbU Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 3ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 16CitT 0CsrA 0
CyC-C 1FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 12
NtrC 0OmpR 15PglZ 0PilB 0PleD 6
PleD_VieA 1PrrA 0RpfG 3RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 7
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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