CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Candidatus Desulforudis audaxviator MP104C
 

Candidatus Desulforudis audaxviator MP104C

Genome
 

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Total size (bp) 2349476
G + C content (%) 60.85
Coding sequences 2157
Coding density (%) 85.33
Average gene length (bp) 929

Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 18
Max spacer hisKA - HATPase domains 51
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
14 5 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (10 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 8
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (16) - Phylogenetic Tree - Data Heatmap
OmpR Family LytTR Family Spo0A Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family IclR Family OmpR Family LytTR Family Spo0A Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family IclR Family
AlpA 0AmiR_NasR 2ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 3MerR 0NarL 0
NtrC 0OmpR 2PglZ 0PilB 0PleD 3
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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