CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Caldicellulosiruptor saccharolyticus DSM 8903
 

Caldicellulosiruptor saccharolyticus DSM 8903

Genome
 

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Total size (bp) 2970275
G + C content (%) 35.25
Coding sequences 2682
Coding density (%) 85.9
Average gene length (bp) 951

Histidine domain Logo
Mean spacer hisKA - HATPase domains 27
Min spacer hisKA - HATPase domains 12
Max spacer hisKA - HATPase domains 49
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
14 17 1 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (23 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 19
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (31) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family Spo0A Family YesN Family CheB Family RpfG Family CheY Family unclassified Family OmpR Family NarL Family Spo0A Family YesN Family CheB Family RpfG Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 3
NtrC 0OmpR 6PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 10unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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