CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Calothrix sp. PCC 7507
 

Calothrix sp. PCC 7507

Genome
 

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Total size (bp) 7023215
G + C content (%) 42.24
Coding sequences 5950
Coding density (%) 79.44
Average gene length (bp) 938

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 28
Max spacer hisKA - HATPase domains 141
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
143 10 7 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (123 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 80
Histidine Kinase, Hybrid 37
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (60) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family YesN Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family OmpR Family NarL Family YesN Family CheB Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 19CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 9
NtrC 0OmpR 13PglZ 0PilB 0PleD 2
PleD_VieA 1PrrA 0RpfG 1RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 8
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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