CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Calditerrivibrio nitroreducens DSM 19672
 

Calditerrivibrio nitroreducens DSM 19672

Genome
 

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Total size (bp) 2157835
G + C content (%) 35.75
Coding sequences 2045
Coding density (%) 93.76
Average gene length (bp) 989

Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 101
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
41 12 0 0 Octad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (36 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 23
Histidine Kinase, Hybrid 9
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD Family CheY Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family RpfG Family CheV Family RsbU Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 9OmpR 4PglZ 0PilB 0PleD 3
PleD_VieA 0PrrA 0RpfG 2RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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