CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Caldicellulosiruptor kronotskyensis 2002
 

Caldicellulosiruptor kronotskyensis 2002

Genome
 

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Total size (bp) 2843785
G + C content (%) 35.1
Coding sequences 2466
Coding density (%) 87.21
Average gene length (bp) 1006

Histidine domain Logo
Mean spacer hisKA - HATPase domains 28
Min spacer hisKA - HATPase domains 7
Max spacer hisKA - HATPase domains 48
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
18 19 0 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (25 + 0) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 21
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (34) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family AmiR_NasR Family CheY Family unclassified Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family AmiR_NasR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 4
CheC 0CheV 0CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 1
NtrC 0OmpR 6PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 12unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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