CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia thailandensis MSMB121
 

Burkholderia thailandensis MSMB121

Genome
 

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Total size (bp) 2763585
G + C content (%) 68.06
Coding sequences 2231
Coding density (%) 86.16
Average gene length (bp) 1067

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 50
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
17 14 2 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (25 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 19
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (30) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family AmiR_NasR Family PleD_VieA Family CheY Family BetR Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family YesN Family CheB Family AmiR_NasR Family PleD_VieA Family CheY Family BetR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 1CheB 1
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 6
NtrC 1OmpR 10PglZ 0PilB 0PleD 0
PleD_VieA 1PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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