CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia sp. CCGE1001
 

Burkholderia sp. CCGE1001

Genome
 

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Total size (bp) 2770302
G + C content (%) 63.54
Coding sequences 2420
Coding density (%) 86.93
Average gene length (bp) 995

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 37
Max spacer hisKA - HATPase domains 57
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
46 11 2 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (42 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 23
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (35) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family YesN Family AmiR_NasR Family CheY Family BetR Family unclassified Family NtrC Family OmpR Family NarL Family YesN Family AmiR_NasR Family CheY Family BetR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 1CheB 0
CheC 0CheV 0CheY 9CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 7
NtrC 1OmpR 12PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 3
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 0
Hpt 1

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