CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia sp. YI23
 

Burkholderia sp. YI23

Genome
 

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Total size (bp) 1773019
G + C content (%) 63.72
Coding sequences 1539
Coding density (%) 86.55
Average gene length (bp) 997

Histidine domain Logo
Mean spacer hisKA - HATPase domains 45
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 52
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
28 10 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (24 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 15
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (27) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family CheV Family AmiR_NasR Family PleD Family VieA Family CheY Family BetR Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family CheV Family AmiR_NasR Family PleD Family VieA Family CheY Family BetR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 1CheB 1
CheC 0CheV 1CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 3
NtrC 1OmpR 8PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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