CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia phymatum STM815
 

Burkholderia phymatum STM815

Genome
 

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Total size (bp) 3479187
G + C content (%) 63.03
Coding sequences 3072
Coding density (%) 86.15
Average gene length (bp) 976

Histidine domain Logo
Mean spacer hisKA - HATPase domains 47
Min spacer hisKA - HATPase domains 39
Max spacer hisKA - HATPase domains 73
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
22 18 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (31 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 24
Histidine Kinase, Hybrid 6
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (36) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family CheY Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 10
NtrC 4OmpR 13PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 2RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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