CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia phytofirmans PsJN
 

Burkholderia phytofirmans PsJN

Genome
 

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Total size (bp) 4467537
G + C content (%) 62.58
Coding sequences 3922
Coding density (%) 85.42
Average gene length (bp) 973

Histidine domain Logo
Mean spacer hisKA - HATPase domains 48
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 73
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
32 22 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (34 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 27
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (48) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family YesN Family CheB Family RpfG Family CheV Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family YesN Family CheB Family RpfG Family CheV Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 1CheY 9CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 12
NtrC 4OmpR 13PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 2RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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