CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia pseudomallei BPC006
 

Burkholderia pseudomallei BPC006

Genome
 

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Total size (bp) 3153284
G + C content (%) 68.51
Coding sequences 3108
Coding density (%) 87.29
Average gene length (bp) 886

Histidine domain Logo
Mean spacer hisKA - HATPase domains 35
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 48
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
21 15 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (24 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 17
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (30) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family AmiR_NasR Family CheY Family BetR Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family AmiR_NasR Family CheY Family BetR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 1CheB 1
CheC 0CheV 0CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 7
NtrC 2OmpR 9PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 1
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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