CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia phymatum STM815
 

Burkholderia phymatum STM815

Genome
 

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Total size (bp) 2697374
G + C content (%) 62.33
Coding sequences 2349
Coding density (%) 84.79
Average gene length (bp) 974

Histidine domain Logo
Mean spacer hisKA - HATPase domains 43
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 173
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
35 6 4 2 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (32 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 16
Histidine Kinase, Hybrid 14
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (33) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD Family CheY Family BetR Family TrxB Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD Family CheY Family BetR Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 1CheB 1
CheC 0CheV 0CheY 10CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 5
NtrC 1OmpR 11PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 1
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 0
Hpt 2

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