CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Burkholderia ambifaria MC40-6
 

Burkholderia ambifaria MC40-6

Genome
 

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Total size (bp) 2769414
G + C content (%) 66.54
Coding sequences 2382
Coding density (%) 85.95
Average gene length (bp) 999

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 40
Max spacer hisKA - HATPase domains 61
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
25 14 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (26 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 17
Histidine Kinase, Hybrid 8
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (30) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family BetR Family unclassified Family NtrC Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD_VieA Family PleD Family CheY Family BetR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 2CheB 2
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 8
NtrC 1OmpR 8PglZ 0PilB 0PleD 1
PleD_VieA 1PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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