CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bradyrhizobium sp. BTAi1
 

Bradyrhizobium sp. BTAi1

Genome
 

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Total size (bp) 8264687
G + C content (%) 64.92
Coding sequences 7393
Coding density (%) 85.85
Average gene length (bp) 960

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 22
Max spacer hisKA - HATPase domains 70
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
90 29 6 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (78 + 8) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 44
Histidine Kinase, Hybrid 28
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 5
Possible incomplete Histidine Kinase 8
P2CS Predicted Response Regulators (80) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 4
CheC 0CheV 0CheY 29CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 13
NtrC 6OmpR 18PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 2RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 5
misPredicted TCS proteins (2)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(10)
HisKa 6
Hpt 4

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