CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bradyrhizobium sp. S23321
 

Bradyrhizobium sp. S23321

Genome
 

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Total size (bp) 7231841
G + C content (%) 64.3
Coding sequences 6892
Coding density (%) 87.82
Average gene length (bp) 922

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 23
Max spacer hisKA - HATPase domains 62
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
76 28 4 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (65 + 4) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 40
Histidine Kinase, Hybrid 21
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 4
P2CS Predicted Response Regulators (72) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family AmiR_NasR Family PleD Family VieA Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RpfG Family AmiR_NasR Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 24CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 14
NtrC 5OmpR 17PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 2RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(6)
HisKa 3
Hpt 3

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