CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bradyrhizobium sp. ORS 278
 

Bradyrhizobium sp. ORS 278

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 7456587
G + C content (%) 65.51
Coding sequences 6717
Coding density (%) 85.72
Average gene length (bp) 952

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 23
Max spacer hisKA - HATPase domains 70
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
81 23 5 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (67 + 9) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 34
Histidine Kinase, Hybrid 28
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 9
P2CS Predicted Response Regulators (69) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 24CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 8
NtrC 7OmpR 16PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 2RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 6
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(9)
HisKa 5
Hpt 4

Locations of visitors to this page