CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Blastococcus saxobsidens DD2
 

Blastococcus saxobsidens DD2

Genome
 

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Total size (bp) 4875340
G + C content (%) 72.95
Coding sequences 4820
Coding density (%) 90.34
Average gene length (bp) 914

Histidine domain Logo
Mean spacer hisKA - HATPase domains 34
Min spacer hisKA - HATPase domains 23
Max spacer hisKA - HATPase domains 53
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
24 26 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (35 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 32
Histidine Kinase, Hybrid 2
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (43) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CheB Family AmiR_NasR Family PleD Family CheY Family IclR Family unclassified Family OmpR Family NarL Family CheB Family AmiR_NasR Family PleD Family CheY Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 0MerR 0NarL 21
NtrC 0OmpR 9PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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