CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bacteroides xylanisolvens XB1A
 

Bacteroides xylanisolvens XB1A

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 5976145
G + C content (%) 40.67
Coding sequences 4404
Coding density (%) 80.72
Average gene length (bp) 1095

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 54
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
57 12 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (54 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 24
Histidine Kinase, Hybrid 30
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (22) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family YesN Family CheY Family unclassified Family NtrC Family OmpR Family LytTR Family YesN Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 4MerR 0NarL 0
NtrC 7OmpR 4PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 2unclassified 3
misPredicted TCS proteins (14)
misPredicted Histidine Kinase 13
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(5)
HisKa 5
Hpt 0

Locations of visitors to this page