CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bacteroides vulgatus ATCC 8482
 

Bacteroides vulgatus ATCC 8482

Genome
 

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Total size (bp) 5163189
G + C content (%) 42.21
Coding sequences 4066
Coding density (%) 88.48
Average gene length (bp) 1124

Histidine domain Logo
Mean spacer hisKA - HATPase domains 41
Min spacer hisKA - HATPase domains 23
Max spacer hisKA - HATPase domains 54
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
40 16 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (46 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 17
Histidine Kinase, Hybrid 29
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (23) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family CheY Family unclassified Family NtrC Family OmpR Family LytTR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 4MerR 0NarL 0
NtrC 9OmpR 5PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 3
misPredicted TCS proteins (3)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(3)
HisKa 3
Hpt 0

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