CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bacteroides sp. CF50
 

Bacteroides sp. CF50

Genome
 

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Total size (bp) 2657245
G + C content (%) 41.5
Coding sequences 2306
Coding density (%) 93.3
Average gene length (bp) 1075

Histidine domain Logo
Mean spacer hisKA - HATPase domains 48
Min spacer hisKA - HATPase domains 21
Max spacer hisKA - HATPase domains 76
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
23 6 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (24 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 17
Histidine Kinase, Hybrid 7
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (15) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family LytTR Family RsbU Family CheY Family unclassified Family NtrC Family OmpR Family LytTR Family RsbU Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 5CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 0
NtrC 1OmpR 3PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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