CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bacillus pseudofirmus OF4
 

Bacillus pseudofirmus OF4

Genome
 

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Total size (bp) 3858997
G + C content (%) 40.26
Coding sequences 3921
Coding density (%) 85.63
Average gene length (bp) 843

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 53
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
20 25 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (36 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 34
Histidine Kinase, Hybrid 1
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (34) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family CheV Family PleD Family CheY Family IclR Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family Spo0A Family YesN Family CheB Family CheV Family PleD Family CheY Family IclR Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 2CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 2MerR 0NarL 5
NtrC 1OmpR 12PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 3
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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