CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Bacillus amyloliquefaciens subsp. plantarum UCMB5036
 

Bacillus amyloliquefaciens subsp. plantarum UCMB5036

Genome
 

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Total size (bp) 3910324
G + C content (%) 46.6
Coding sequences 3636
Coding density (%) 88
Average gene length (bp) 946

Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 55
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
12 25 0 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (33 + 1) - Phylogenetic Tree - Data Heatmap
Classic CheA Classic CheA
Histidine Kinase, Classic 32
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (33) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family Spo0A Family CheB Family CheV Family CitT Family CheY Family YcbB Family unclassified Family OmpR Family NarL Family LytTR Family Spo0A Family CheB Family CheV Family CitT Family CheY Family YcbB Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 1CheY 3CitT 1CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 8
NtrC 0OmpR 14PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 1TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 1YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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