CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Azospirillum lipoferum 4B plasmid AZO_p5
 

Azospirillum lipoferum 4B plasmid AZO_p5

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 478032
G + C content (%) 67.74
Coding sequences 406
Coding density (%) 88.53
Average gene length (bp) 1042

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 2
Max spacer hisKA - HATPase domains 55
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
9 5 0 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (11 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 6
Histidine Kinase, Hybrid 2
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (8) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family RpfG Family CheY Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family RpfG Family CheY Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 1CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 2
NtrC 1OmpR 1PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 1RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

Locations of visitors to this page