CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Azospirillum brasilense Sp245 plasmid AZOBR_p3
 

Azospirillum brasilense Sp245 plasmid AZOBR_p3

Genome
 

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Total size (bp) 778798
G + C content (%) 68.19
Coding sequences 803
Coding density (%) 90.12
Average gene length (bp) 874

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 22
Max spacer hisKA - HATPase domains 54
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
7 4 1 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (14 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox Classic Hybrid Unorthodox
Histidine Kinase, Classic 5
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (9) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family PleD Family CheY Family FrzZ Family NtrC Family OmpR Family NarL Family PleD Family CheY Family FrzZ Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 4CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 1
NtrC 1OmpR 1PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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