CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444)
 

Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444)

Genome
 

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Total size (bp) 6365727
G + C content (%) 41.42
Coding sequences 5043
Coding density (%) 81.63
Average gene length (bp) 1030

Histidine domain Logo
Mean spacer hisKA - HATPase domains 46
Min spacer hisKA - HATPase domains 29
Max spacer hisKA - HATPase domains 144
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
140 13 7 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (121 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 68
Histidine Kinase, Hybrid 47
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (68) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family YesN Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family OmpR Family NarL Family YesN Family RpfG Family RsbU Family PleD_VieA Family PleD Family VieA Family CheY Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 21CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 12
NtrC 0OmpR 16PglZ 0PilB 0PleD 3
PleD_VieA 1PrrA 0RpfG 1RsbU 3Sarp 0
Spo0A 0TrxB 0VieA 1VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 9
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 2
Hpt 0

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