CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Anaerolinea thermophila UNI-1
 

Anaerolinea thermophila UNI-1

Genome
 

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Total size (bp) 3532378
G + C content (%) 53.85
Coding sequences 3166
Coding density (%) 92.38
Average gene length (bp) 1031

Histidine domain Logo
Mean spacer hisKA - HATPase domains 42
Min spacer hisKA - HATPase domains 36
Max spacer hisKA - HATPase domains 56
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
42 24 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (40 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 33
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (51) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family CyC-C Family CheB Family RpfG Family PleD Family CheY Family FrzZ Family unclassified Family OmpR Family NarL Family CyC-C Family CheB Family RpfG Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 10CitT 0CsrA 0
CyC-C 1FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 9
NtrC 0OmpR 15PglZ 0PilB 0PleD 2
PleD_VieA 0PrrA 0RpfG 1RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 11
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

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