CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Anaeromyxobacter dehalogenans 2CP-1
 

Anaeromyxobacter dehalogenans 2CP-1

Genome
 

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Total size (bp) 5029329
G + C content (%) 74.72
Coding sequences 4473
Coding density (%) 90.31
Average gene length (bp) 1015

Histidine domain Logo
Mean spacer hisKA - HATPase domains 44
Min spacer hisKA - HATPase domains 18
Max spacer hisKA - HATPase domains 120
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
111 33 3 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (87 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid CheA Classic Hybrid CheA
Histidine Kinase, Classic 63
Histidine Kinase, Hybrid 17
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 7
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (97) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family PleD Family CheY Family FrzZ Family MerR Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family PleD Family CheY Family FrzZ Family MerR Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 6
CheC 0CheV 0CheY 29CitT 0CsrA 0
CyC-C 0FrzZ 2HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 1NarL 3
NtrC 25OmpR 6PglZ 0PilB 0PleD 4
PleD_VieA 0PrrA 2RpfG 2RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 16
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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