CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Amycolatopsis orientalis HCCB10007
 

Amycolatopsis orientalis HCCB10007

Genome
 

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Total size (bp) 8948591
G + C content (%) 69
Coding sequences 8113
Coding density (%) 90.32
Average gene length (bp) 996

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 60
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
53 64 2 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (93 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Classic Hybrid
Histidine Kinase, Classic 91
Histidine Kinase, Hybrid 2
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (93) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family CheY Family TrxB Family IclR Family OmpR Family NarL Family LytTR Family RsbU Family AmiR_NasR Family CheY Family TrxB Family IclR Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 2CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 2
LmbE 0LysR 0LytTR 2MerR 0NarL 61
NtrC 0OmpR 23PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 0RsbU 1Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 0
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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