CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Alteromonas macleodii str. Aegean Sea MED64
 

Alteromonas macleodii str. Aegean Sea MED64

Genome
 

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Total size (bp) 4397537
G + C content (%) 44.83
Coding sequences 3815
Coding density (%) 87.32
Average gene length (bp) 1007

Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 102
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
61 21 0 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (48 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 25
Histidine Kinase, Hybrid 18
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (53) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD_VieA Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 2
CheC 0CheV 2CheY 6CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 9
NtrC 4OmpR 11PglZ 0PilB 0PleD 4
PleD_VieA 1PrrA 0RpfG 4RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (5)
misPredicted Histidine Kinase 2
misPredicted Response Regulator 2
misPredicted Phosphotransfer Protein 1
Phosphotransfer Proteins(7)
HisKa 3
Hpt 4

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