CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Alteromonas macleodii str. Ionian Sea U8
 

Alteromonas macleodii str. Ionian Sea U8

Genome
 

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Total size (bp) 4395035
G + C content (%) 44.86
Coding sequences 3795
Coding density (%) 86.25
Average gene length (bp) 999

Histidine domain Logo
Mean spacer hisKA - HATPase domains 40
Min spacer hisKA - HATPase domains 15
Max spacer hisKA - HATPase domains 102
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
63 24 0 0 Pentad 1
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (53 + 1) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 26
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 5
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 1
P2CS Predicted Response Regulators (58) - Phylogenetic Tree - Data Heatmap
NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family unclassified Family NtrC Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family PleD Family CheY Family FrzZ Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 0CheV 2CheY 9CitT 0CsrA 0
CyC-C 0FrzZ 1HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 9
NtrC 5OmpR 11PglZ 0PilB 0PleD 5
PleD_VieA 0PrrA 0RpfG 4RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(5)
HisKa 2
Hpt 3

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