CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Aeromonas hydrophila subsp. hydrophila ATCC 7966
 

Aeromonas hydrophila subsp. hydrophila ATCC 7966

Genome
 

Enlarge Image - Zoomable Map
Total size (bp) 4744448
G + C content (%) 61.55
Coding sequences 4121
Coding density (%) 87.52
Average gene length (bp) 1008

Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 13
Max spacer hisKA - HATPase domains 55
Quick Search
Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
39 31 0 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (46 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 28
Histidine Kinase, Hybrid 5
Histidine Kinase, Unorthodox 10
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (57) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD Family VieA Family CitT Family CheY Family CheC Family unclassified Family NtrC Family PrrA Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family CheV Family RsbU Family PleD Family VieA Family CitT Family CheY Family CheC Family unclassified Family
AlpA 0AmiR_NasR 0ArsR 0BetR 0CheB 3
CheC 1CheV 4CheY 3CitT 2CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 3MerR 0NarL 7
NtrC 5OmpR 15PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 1RpfG 5RsbU 1Sarp 0
Spo0A 0TrxB 0VieA 2VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(2)
HisKa 1
Hpt 1

Locations of visitors to this page