CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Advenella kashmirensis WT001
 

Advenella kashmirensis WT001

Genome
 

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Total size (bp) 4365995
G + C content (%) 54.89
Coding sequences 3873
Coding density (%) 68.86
Average gene length (bp) 776

Histidine domain Logo
Mean spacer hisKA - HATPase domains 56
Min spacer hisKA - HATPase domains 42
Max spacer hisKA - HATPase domains 120
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
13 7 0 0 0
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TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (10 + 0) - Phylogenetic Tree - Data Heatmap
Classic Classic
Histidine Kinase, Classic 10
Histidine Kinase, Hybrid 0
Histidine Kinase, Unorthodox 0
Histidine Kinase, CheA 0
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (16) - Phylogenetic Tree - Data Heatmap
NtrC Family PrrA Family OmpR Family YesN Family AmiR_NasR Family unclassified Family NtrC Family PrrA Family OmpR Family YesN Family AmiR_NasR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 0
CheC 0CheV 0CheY 0CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 0MerR 0NarL 0
NtrC 1OmpR 11PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 1RpfG 0RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 1
misPredicted TCS proteins (12)
misPredicted Histidine Kinase 6
misPredicted Response Regulator 6
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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